K35704

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35704

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35704

Determination of introduced cDNA(s)

  • J033074G16 - Rice Full-length cDNAs - Original: J033074G16

    full reading [+] show sequence

    Nucleotide sequence: J033074G16 - full reading 
    GGGTTCTGGT CCATGTTTGC TTCTCAGAAT TTTGCTTATA ATTTTGATTT 
    TTCTCGTCTT GATCTATTGT TAGATTGACT CTGATGTACA GTTAGCTCGG 
    GAATACTGAA GCTACGATTG CGGGGCAGTA ATTCAAAATT GCTCTTTGAA 
    ATGTGCTACG GTACCAAATT CAAAAATCAA ACTTGAGATC ATTGGCTTGC 
    CCACTTGAAA CAGGAATTGG ATGGATTTCC CAACAATGCA TCATTTTCTG 
    TTTTTTGCTT CTGAATTTAT GCCTTTATTC TGCATCGTGG ATTACTCTTT 
    AAATTGTTTG TATGGATCCT CCAAAGAACG GTTAGTTCAT CACCGTTTTT 
    GTTCTTTGAT CTTGCAGACT TGGCATTTGT AGAGTTTTTA GATTTATAGA 
    TAGCAAAGAT GTCGGCACAG GCGGAGCTTT CCCGTGAGGA GAATGTGTAC 
    ATGGCCAAGC TCGCTGAGCA AGCCGAGAGG TACGAGGAGA TGGTCGAATT 
    CATGGAGAAG GTGGCCAAGA CGGTTGACTC TGAGGAGCTC ACCGTGGAGG 
    AGCGCAACCT CCTGTCTGTT GCATACAAGA ATGTGATTGG AGCCCGCCGT 
    GCGTCATGGC GCATTATCTC CTCCATTGAG CAGAAGGAGG AAAGCCGTGG 
    TAACGAGGAC CGTGTCACAC TCATCAAGGA CTACCGTGGC AAGATCGAGA 
    CTGAGCTCAC CAAGATTTGC GACGGCATTC TCAAGCTGCT TGAATCCCAC 
    CTTGTCCCCT CTTCCACTGC CCCTGAGTCC AAGGTCTTCT ACCTCAAAAT 
    GAAGGGTGAC TACTACAGGT ACCTTGCCGA ATTTAAGACC GGGGCTGAGA 
    GGAAGGATGC TGCTGAGAAT ACCATGGTGG CATACAAGGC TGCTCAGGAC 
    ATTGCTTTGG CTGAGCTGCC TCCTACTCAT CCAATTAGGC TTGGGCTAGC 
    TCTTAACTTC TCAGTGTTCT ACTATGAGAT CCTCAACTCG CCTGATCGTG 
    CTTGCAACCT CGCAAAGCAG GCTTTTGATG AGGCCATCTC GGAGCTGGAC 
    ACCCTGAGCG AGGAGTCCTA CAAGGACAGC ACTTTGATCA TGCAACTCCT 
    CCGTGATAAC CTGACCCTGT GGACTTCAGA CATCTCGGAG GACACCGCGG 
    AAGAGATCAG GGAAGCTCCG AAGCGCGACT CCAGCGAGGG GCAGTAAAGC 
    CGGCTTTATG TGCCCTAGAA GCTTGTAGCT AGTGCTTTGC TACTGTGTAA 
    TGACACCTAT GTGGCTGTGA TTGTTGTCGG GAAATCTGGG GCTCCCCCGT 
    ATGTGAGGTT GCTAGCGATG GTTTTGCAGT CTCGCCTTTA AGCTACTCGT 
    AGCAGAGCAG GTGGGGGTCT GTGGAGCCAG GCCTGGTTGG GGGTGGGGGA 
    GCCTCTTGAA CTGCTTGGTG GCACTTCCTG TTTTTCTGTT TGCCTTTTTA 
    TTGGTGTTTA TTGTTATGGT CAATCCTGTG TCTATATCTT GGTCCC

    Gene models with high sequence identity

    1. AT3G02520.1 [+] show detail - general regulatory factor 7
      E-value: 5e-121; Score: 431.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPIR 14-3-3 protein 5e-179
    HMMPfam 14-3-3 protein 1.7e-115
    Gene3D 14-3-3 protein 1.9e-108
    superfamily 14-3-3 protein 2.9e-107
    HMMPanther 14-3-3 protein 1.6e-207
    HMMSmart 14-3-3 protein 6.9e-211
    PatternScan 14-3-3 protein 0
    PatternScan 14-3-3 protein 0
    FPrintScan 14-3-3 protein 1.1e-88
    FPrintScan 14-3-3 protein 1.1e-88
    FPrintScan 14-3-3 protein 1.1e-88
    FPrintScan 14-3-3 protein 1.1e-88
    FPrintScan 14-3-3 protein 1.1e-88
    FPrintScan 14-3-3 protein 1.1e-88
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT3G02520.1

    Model type
    Protein coding
    Short Description
    general regulatory factor 7
    Curator Summary
    Encodes GF14 ν, a 14-3-3 protein isoform (14-3-3ν).
    Computational Description
    general regulatory factor 7 (GRF7); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: nuclear envelope, chloroplast stroma, plasma membrane, chloroplast, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 3 (TAIR:AT5G38480.1); Has 2692 Blast hits to 2682 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1258; Fungi - 312; Plants - 765; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR