K35927

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35927

Determination of introduced cDNA(s)

J013040J18 - Rice Full-length cDNAs - Original: J013040J18

full reading [+] show sequence

GATTATAGCC ATTCTCTCCA GCCACCCTCT CGCCTCCTCC TCCTCTCATC 
ATCTCCCATC CTTCCTCCTC CTCAACTCCT CTCCTCTCTT CGCTTCTTCT 
CTCATGCTAG CTACTACTAC TAGCTTCTCC TTCTCCTGTC GCACGGTGCG 
GCGGAAGTGG TAGTAGTAGT AGCTTTCTTG GTTTAAGCAA GGATCGGCGA 
GGACGGACGC CGGCGGCGAC CGAGCTTGGG GTGTGTGTGT GTAAAGTTGT 
CTTCTCCGGC GGATGAGCTG TTGTTTCTTG GCTCGCGCCT CCGGCGTGTC 
CGGCTTGTTG CCTTCCATGT CCGCGACGCT GCAATAATTC GCTTCCATAT 
TTGCTGCCGC CATGCCATGT ATAGCCGCGC TGCTGATGCG GCCCTCCAGC 
CGTTTTAATG CGTGCCAAAT CCTCTCCCCG AGGCTCATAA AAATTATTGA 
ATTGTTGGGA TCTGAGGGGA TCCGCCGGAG TTGGTAGGAT CACGGTGGAG 
TGATTTTGGC CGGAGGAAGA AGAAGAAGGA GAAAAACTGG TGTTTGTTTT 
GTCGTTTGTA GTGAGCTCGC GTGATGAGCT TCGGTGGCAT GTTCGATGGC 
GCCGGCTCCG GCGTCTTCTC CTACGACGCC GGCGGCGGCG GCGGCGGCGG 
CGGAGTACAC AACTCCCGCC TCCTCCCTAC GCCGCCCGTC CCCAAGCCCG 
GCGGCGGGTT CGCCGCTCCC GGCCTCTCTC TCGGCCTGCA AACTATGGAC 
GGTAGCCAGC TCGGCGACGT GAACCGGTCG CTTGCCATGA TGGGCAACGG 
CGGGAGCGGC AGCGGCGGCG ACGGCGACTC GCTCCAGCGA CAGTGCCAGT 
ATCTCGCATG CTGAAGCTGG CGCAGCGGAT GACGGACAAC TTCTGCGCGG 
GGGTGTGCGC GTCGGCGGCG CAGAAGTGGC GGCGCCTGGA CGAGTGGCGC 
GGCGAGGGTG GGGGCGGCGG CGGTGGCGGC GGCGGGGACG GGGAGGACAA 
GGTGCGGATG ATGGCGCGGC ACAGCGTGGG CGCGCCGGGG GAGCCGCCGG 
GCGTCGTGCT GAGCGCCACC ACGTCGGTGC GGCTCCCCGG CACGCTGCCG 
CAGCGCGTGT TCGACTACCT CCGCGACGAG CAGCGGCGCG GCGACTGGGA 
CATCCTTGCC AACGGCGAGG CCATGCAGGA GATGGACCAC ATCGCCAAGG 
GCCAGCACCA CGGCAATGCC GTCTCCCTCC TCCGTCCAAA TGCCACAAGC 
GGGAACCAGA ACAACATGCT GATCCTCCAG GAGACGTGCA CCGACTCATC 
GGGCTCCCTC GTCGTCTACG CTCCGGTGGA CGTGCAGTCG ATGCACGTCG 
TCATGAACGG CGGCGACTCC GCCTACGTCT CCCTCCTCCC CTCCGGCTTC 
GCCATCCTCC CCGACGGCCA CAACAATGGC GCCTCGCCGT CTCCGGCAGA 
GGTCGGCAGC GGCGCCTCGC CGAACTCCGC CGCCGGTGGC GGTGGCGGTA 
GCAACAACAC CGGGTCGCTG GTGACGGTGG CGTTCCAGAT ACTCGTCAAC 
AACCTGCCGA CGGCGAAGCT CACCGTGGAG TCCGTCGACA CCGTCAGCAA 
CCTCCTCTCC TGCACCATCC AGAAGATCAA GTCGGCACTG CAGGCCAGCA 
TCATCTCACC ATAGATAAGT GGACATTTGA CGTGGATTCC GACTCGACCA 
TTTTTGAGTC GAGTCGGATG CCATCTCAAA TGTCTAACTT TTGAAGGTTA 
GAAGACTGAG AGGACTTCCG CGGCGGGCGA TGGCCGACCG AAACTGGCTG 
ATGGATGCAA CTCAATCGTT GATCAGGTAG AGTTTTCGAG AGGCGATATG 
CGAGCGAGGA TAAAAATAAA ATTAAGTTAT ATATAGTGTG TGGAGTATAT 
TTGCATAGAT GAGCAAATTA AATGGGGTGA GTTGCAGAGG GATCAAGTCA 
AGAACGAACC TTGCGCTAGG CTTGGCTCAA GCTGATGTGG TGGTTCGGGT 
ATTGACTTAG TCTCTGGTGA AAATAAACCC CTAGGGCTTT GATCTCCTAT 
ATATATCTAG CAGTTTGCTT AATTTAACCA TTTTGTGAAG TTTTTTTTAA 
TTCTCCAAAA TGGGGGAAAT ATAGAGAAAC AATACTGATC AGATCCCCAA 
GATCGTTGGT GTTTGTTTAG TTTGCATAAT GTTGGAATGA GTTGATATAT 
AAACATGTTT ATTTTGGC

Gene models with high sequence identity

AT4G00730.1 [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
E-value: 4e-72; Score: 270.00

InterPro Scan Digest

See the detailed result >

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR