K36002

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36002

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36002

Determination of introduced cDNA(s)

J013077G18 - Rice Full-length cDNAs - Original: J013077G18

full reading [+] show sequence

GAGCCCCTGC ACAGTACACA CAGCAGCCAT GACTAAGGTC TTCACCAGGT 
CTCTCCTAAT GTACTTCAAC AAGATCGTCA GGAGCCTCAG ACCCCTCGTC 
CATTCGCCGC CGCCGCAGCC GGCGGCGGCA GACAACATCG TCCGGTGGCC 
GTCGGACGAC GAGCTGCTGC CGGCGCCGGA CACCACCACG ACGAGCGTCG 
TCACCACCGT GTGCAAGGTG GAGGGCGGCC TGCTGATGTC GCCGTCCACT 
TTCCCGTACT TCATGCTCGT CGCCCTGGAG GCAGGAGGTG GCGGCGGCGG 
CCTCCTCCGC GGCCTCCTGC TCCTGCTGCT CTACCCGGCG CTGCGCCTGC 
TCGGCCATGA CCGGGCGATC AGGGTCATGG CCATGGTGAG CTTCGCCGGC 
GTGAGGAAGG ACGGGTTCCG GCTGGGCAGC TCGACGTTGC CCAGGCTGCT 
CCTGGAGGAC GTGAGCGCCG AGGTGTTCGA GGCTGCGGTG CGGCGGCGGC 
GGTGCGTGTG CGTGAGCGGC ATGCCGAGGG AGATGGTGGA GCCGTTCCTG 
AGGGAGTACC TCGGCGTCGA CGCCGTCGTC GCGCCGGAGG TGAGGGCGTT 
CGGCGGGTAC TACCTCGGTC TCATGGAGTC CGACGGCGAG GTGCTCCGGA 
GGCTGGACAT GGAGGAGGTG ATCGGAGGTG GGGAGAAGGA GGAGACGTGC 
GGCGACGGCG ATGGCCGCGT CGTCGTCGGC ATTGGTGGAC GTGGGAGATC 
GTTCAGTCGG ATCTTTCAAA AGTATTGCAA GGAGGTGTAC GTGGCAACCA 
AGTCGGCGCG GCGGCGGTGG CGCCCCCTCC ATCCCCGGCG CTACGCGAAG 
CCTCTCATCT TCCACGACGG CCGCACTGCA TTCCGGCCGA CGGCGGCCGC 
GACGCTCGCC ATGTTCATGT GGCTGCCGCT GGGCGCACCC CTCGCCATCC 
TCCGCACCGC CGTCTTCCTC CTCCTCCCCT TCTCCATCTC CGTGCCACTC 
CTCGCCGCCC TAGGCATGCA CAGCCGCCGC ATCTCCTCCT CCTCGTTGCC 
GCCGGCGGCG GCGGCGGCGC ACAACCTTTT CGTCTGCAAC CACCGCTCCC 
TGGTCGACCC GCTCTACGTC TCCGCCGCCA CCGGCCGCAC CGACCTCTCC 
GCCGCCACCT ACAGCATCAG CCGCCTCTCC GAGATCCTGG CGCCCATCCG 
CACCTTCCGC CTCACCCGCG ACCGCGCCAC CGACCGTGCC GCCATGCAGG 
CCCACCTGTC CCTCCCCGGC GGCGGCGGCG GCGGGCTGGT GGTGTGCCCC 
GAGGGCACCA CCTGCCGGGA GCCGTTCCTG CTGCGGTTCA GCCCGCTGTT 
CACGGAGCTC GGCGCCGACG TGCAGCCCGT GGCGCTGCAG TCGGCGGTGT 
CCATGTTCCA CGGCACGACG GCGGGGGGGT GGAAGCTGCT CGACCCGCTC 
TACCTGCTCA TGAACCCCAC GCCGGCCTAC GTCGTGCAGC TCCTGGATCC 
CGTCGCCGTC GGAGGCGAGG GCGGCGGCGG CGGACCGGAG TTGGCGAACG 
AGGTGCAGCG GCGGATCGCG GAGGCGCTGG GGTACACGCG CACGGCGCTG 
ACGAGGAGGG ACAAGTACCT CGCCCTCACC GGCAACGATG GCGGCGTCGA 
TCGGCGCCGC TTGCATGCAT GGTGTCTACT GTGGGTAAAG TACGTGTTGT 
GCTTGTGCCT GGCTTGGCGT AATTAGGAAG CTTAATTACC CAGTTAAACA 
AGGTGTGTAA GACACACCCC GGTTGTGCTC AGTTGTAACT TGTAATGGAG 
TTACTCATAC TGTACTCCCT CCCTCTGTCT TAAAATTAAA TTAACATTTT 
GGGACCGAGA GAGTAACTTG TACGAGACAT TGATGTTTAT TATTTATATA 
AGTGGTGTTC TTTTATCCTC T

Gene models with high sequence identity

AT1G02390.1 [+] show detail - glycerol-3-phosphate acyltransferase 2
E-value: 8e-82; Score: 301.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Glycerol-3-phosphate (1)-acyltransferase	1.9e-34
HMMSmart	Phospholipid/glycerol acyltransferase	3.1e-11
Coil	coiled-coil	0
HMMPfam	Phospholipid/glycerol acyltransferase	0.00012

See the detailed result >

AT1G02390.1

Model type: Protein coding
Short Description: glycerol-3-phosphate acyltransferase 2
Curator Summary: Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.
Computational Description: glycerol-3-phosphate acyltransferase 2 (GPAT2); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 3 (TAIR:AT4G01950.1); Has 367 Blast hits to 357 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR