K36247

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36247

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36247

Determination of introduced cDNA(s)

J013091I12 - Rice Full-length cDNAs - Original: J013091I12

full reading [+] show sequence

GTGCCAATCA CAAGAGCAAG AAGCTACTGA TCTTAGCTGA GCTAGAGTTC 
CAGTGATCAT TAAGGAAAGA ATTAGCACTT GGTCAATCAC ACATAGGTAA 
TTAAGATTAA TTGCGATCGA GATCATATCA CTAGCTAGCT AGCTGTGTGT 
ACGGAGTACG GTGCCATGGC TTCCAGGACT TGGCATTGCT GGTTGTTGCT 
CGTCTTCTTC CTCCTCTCCG ACGACGCCTC CGGGCAGCTG TCGACGTCGT 
ACTACGCAGA TAGCTGCCCG TCGGTGGAGA AGGTCGTGCA CGCCACCGTG 
GCGAGCGCCA TCCAGGCCGA GCGCCGGATG GGCGCCTCCC TCATCCGCCT 
CTTCTTCCAC GACTGCTTCG TCCAGGGCTG CGACGCGTCC ATCCTTCTGG 
ACGACGTGCC GGCGACCGGG TTCGTCGGCG AGAAGACCGC CGCCCCGAAC 
AACAACTCCG TGCGCGGGTA CGAGGTCATC GACCAGATCA AGGCCAACGT 
CGAGGACGTC TGCCCCGGCG TTGTCTCCTG CGCCGACATC GTCGCCCTCG 
CCGCGCGCGA CAGCACCGCC CTGCTCGGCG GGCCGAGCTG GGCGGTGCCG 
CTCGGCCGGT GCGACTCGAC GACGGCGAGC CGCAGCGAAG CGAACAGCGA 
CCTGCCGGGG CCGGGGAGCA ACCTCACCAT GCTCATCGCG CGGTTCGGCA 
ACAAGGGCCT AAGCCCGCGC GACATGACGG CGCTGTCGGG CTCGCACACC 
GTCGGCTTCT CGCAGTGCAC CAACTTCCGC GCCCACATCT ACAACGACGC 
CAACATCGAC CCGTCGTTCG CCGCGCTGCG CCGCCGCGCG TGCCCCGCCG 
CGGCACCCAA CGGCGACACC AACCTGGCGC CGCTCGACGT GCAGACGCAG 
AACGCGTTCG ACAACGCCTA CTACGGCAAC CTGCTGGTCC GGCGAGGCCT 
GCTCCACTCC GACCAGGTGC TGTTCAACGG CGGGTCGCAG GACGCGCTGG 
TGAGGCAGTA CGCCGCCAAC CCGGCGCTGT TCGCCGCCGA CTTCGCCAAG 
GCGATGGTGA AGATGGGGAA CATCGGGCAG CCCAGCGACG GCGAGGTCAG 
GTGCGACTGC AGGGTCGTCA ACGACAGCTG ATCATCCATG GGCTGTATAT 
ATTTTCATGT GGATTTGTGG TGACGTATCT TTGTTGTAAA TACTGTGATG 
CAATAAAGCA GCGTGGTAAC ATCGTTGCTA TTTTCTCCC

Gene models with high sequence identity

AT5G05340.1 [+] show detail - Peroxidase superfamily protein
E-value: 2e-88; Score: 323.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Haem peroxidase	1.2e-109
PatternScan	Peroxidases heam-ligand binding site	0
PatternScan	Peroxidase, active site	0
ProfileScan	Haem peroxidase, plant/fungal/bacterial	74.103
HMMPfam	Haem peroxidase, plant/fungal/bacterial	1.3e-78
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Plant peroxidase	1.3e-60
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.6e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.6e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.6e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.6e-30
FPrintScan	Haem peroxidase, plant/fungal/bacterial	3.6e-30
Gene3D	no description	2.7e-61

See the detailed result >

AT5G05340.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR