K36650

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36650

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36650

Determination of introduced cDNA(s)

J033068K09 - Rice Full-length cDNAs - Original: J033068K09

full reading [+] show sequence

GTCAAGCAAC CACTGGTAGT ACACTGCAAA TATTCCTCTT GCCGTGTCAC 
TGGCTTGCTC TGCTCGATCA CGAGCTTGAA CTGTGCTTGT GATCAGCGAG 
CAATGGCTAC TCAATGGGTG CTCGTGGTGG TTGCTGTAAT GGCCGTGCTC 
TTCGCCGGAG GCGCCGCCGG CGGGCAGCTG TCGACGAGGT ACTACGACGG 
CAAGTGCCCG AACGTGCAGA GCATCGTGAG GGCCGGGATG GCGCAGGCCG 
TGGCGGCGGA GCCCCGGATG GGCGCCTCCA TCCTCCGCAT GTTCTTCCAC 
GACTGCTTCG TCAACGGGTG CGACGCGTCC ATCTTGCTCG ACGACACGGC 
CAACTTCACC GGCGAAAAGA ACGCCGGGCC GAACGCCAAC TCGGTGCGCG 
GGTACGAGGT GATCGACGCC ATCAAGACCC AGGTCGAGGC GTCCTGCAAC 
GCCACCGTCT CCTGCGCCGA CATCCTCGCC CTCGCCGCGC GCGACGCCGT 
CAACCTGCTG GGCGGGCCGA CGTGGACGGT GCAGCTGGGT CGCCGCGACG 
CGCTGACGGC GAGCCAGAGC GCGGCGAACG GCAACCTGCC GGGGCCGGGG 
TCCGACCTCG CCACGCTCGT CACCATGTTC GGCAACAAGG GGCTGTCGCC 
GCGGGACATG ACGGCGCTGT CGGGCGCGCA CACGCTGGGG CAGGCCCGGT 
GCGCCACGTT CCGCAGCCGC ATCTTCGGCG ACGGCAACGT CGACGCCGCC 
TTCGCCGCGC TCCGGCAGCA GGCGTGCCCG CAGTCCGGCG GCGACACGAC 
GCTGGCGCCC ATCGACGTGC AGACGCCCGA CGCGTTCGAC AACGCCTACT 
ACGCGAACCT GGTGAAGAAG CAGGGGCTGT TCCACTCCGA CCAGGAGCTG 
TTCAACGGCG GGTCGCAGGA CGCGCTGGTG AGGAAGTACG CCGGCAACGC 
CGGCATGTTC GCCGCCGACT TCGCCAAGGC GATGGTGAGG ATGGGCGCCC 
TCCTGCCGGC GGCCGGGACG CCGACCGAGG TCCGTCTGAA CTGTAGGAAG 
GTCAACTAAA GTCAACCTGA TGACGAACGT GTCCAAGAAC TACAAGTGTA 
GTGAACAGTC AAGATGGCTG TTTCTGCTCC TTTGGATTTA TTTTTGTGAT 
CTGGTTAATA TTTTTATTAT TTGTGGAATT AATAATGTTG CTGTAAACAT 
CTTTTGATAG CTGCCAGTCA GTCAATGATC ATCTGTAAGC ATAAAAAAAC 
GTTTGAAAAT ATGTTGCACA TGTTTTTGTG

Gene models with high sequence identity

AT5G05340.1 [+] show detail - Peroxidase superfamily protein
E-value: 1e-97; Score: 353.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	4.8e-63
ProfileScan	Haem peroxidase, plant/fungal/bacterial	73.002
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Plant peroxidase	1e-63
FPrintScan	Haem peroxidase, plant/fungal/bacterial	4.5e-34
FPrintScan	Haem peroxidase, plant/fungal/bacterial	4.5e-34
FPrintScan	Haem peroxidase, plant/fungal/bacterial	4.5e-34
FPrintScan	Haem peroxidase, plant/fungal/bacterial	4.5e-34
FPrintScan	Haem peroxidase, plant/fungal/bacterial	4.5e-34
superfamily	Haem peroxidase	1.5e-112
HMMPfam	Haem peroxidase, plant/fungal/bacterial	2.5e-79
PatternScan	Peroxidases heam-ligand binding site	0
PatternScan	Peroxidase, active site	0

See the detailed result >

AT5G05340.1

Model type: Protein coding
Short Description: Peroxidase superfamily protein
Computational Description: Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR