K36948

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K36948

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K36948

Determination of introduced cDNA(s)

  • J033003F07 - Rice Full-length cDNAs - Original: J033003F07

    full reading [+] show sequence

    Nucleotide sequence: J033003F07 - full reading 
    GACGCGAAAC AAAACCTCCC CACGCCGCGA GATCTCGCAG CAATGGCGGC 
    GCCGCGCCAC CACCACCTCG CCCTCGCCGT CGCCCTCGCC CTCCTCGTCG 
    TCACCGCCGC GGCGGCGGAC GAGGGGGGAC CGCGGGGGAG GCGGGTGCTG 
    GTGCTCGTGG ACGACCTGGC GGTGCGGTCG TCGCACTCGG CCTTCTTCGC 
    GTCGCTCCAG GGGCGAGGGT TCGATCTCGA CTTCCGCCTC GCCGACGACC 
    CCAAGCTCTC ACTCCACCGC TACGGCCAGT ACCTCTACGA CGGCCTCGTC 
    CTCTTCGCCC CCTCCACCCC GCGTTTTGGA GGATCAGTGG ACCAAAGTTC 
    AATTCTGGAA TTCATCGATG CTGGTCATGA TATGATCCTG GCAGCAGACT 
    CTTCGGCCTC TGATCTTATC CGAGGCATTG CAACAGAGTG TGGGGTTGAT 
    TTTGATGAGG ATCCAGAGGC AATGGTTATT GATCACATTA ATTATGCTGC 
    CACTGATGCT GAAGGTGATC ATACTTTGAT TGCTGGTGAT GACCTCATCC 
    AGTCAGATGT GATACTGGGG TCAAAGAAAA TTGAGGCCCC TGTATTATTT 
    CGGGGAATTG GACATGCGGT TAATCCATCT AACAGCTTGG TCCTGAAAGT 
    CTTATCCGCC TCTCCGTCAG CATACTCAGC AAACCCAAAG TCTAAGTTGG 
    CTTCCCCTCC ATCTCTCACA GGGTCGGCTA TATCACTGGT TTCTGTTATG 
    CAGGCAAGAA ACAATGCTCG GGTCTTGATA TCTGGATCAC TCGATCTGTT 
    TAGCAACAGG TTCCTAAAAT CTGGTGTTCA GAAGGCCGGT AGCAAGATAA 
    GGCATGAGAA AGCTGGAAAT GAACAATTTG TGACAGAAAC AAGCAAATGG 
    GTCTTCCATG AGAGGGGCCA TCTAAAGGCA GTGAATGTCA AGCATAACAA 
    GGTTGGGGAG ACAAATGAGC CTGGCATGCA CCGCATCAAT GATGACTTGG 
    AATACTCTGT TGAGATCTAC GAATGGTCTG GGACCAGCTG GAAGCCGTAT 
    GTTGCTGATG ATGTTCAAGT TCAGTTTTAC ATGATGAGCC CTTATGTTCT 
    GAAGACACTG TCGACTGACA AGAAGGGTGT ATTTTCAACA TCCTTCAAAG 
    TTCCAGATGT TTATGGAGTT TTCCAGTTCA AAGTTGAGTA CCAGAGGCTT 
    GGATATACTG GTCTCTCTCT TTCTAAGCAG ATTCCAGTGC GCCCTTACAG 
    GCATAATGAG TATGAAAGAT TCATAACTTC GGCATATCCG TACTATGCTG 
    CGTCGTTTTC AACAATGGGA GCCTTCTTCA TCTTCTCATT TGTGTACCTG 
    TACCACAAAT AGATAACTCA TGAGAGAGCA CGAGTTACCT GAGGCTGATG 
    TGTGCTAGAT CCATGCACTG ATTGTGCTGT AAACCCAGTG TTGGGGGTTC 
    CAAGTTCATA GAACCATATT TTTGTAGCGC AATCTAGAGC ACCTTTGACG 
    ACCACTATCA TTGATAACAA GAAATTGTAC TCCTGCTGCT AGAATCTTCC 
    AACCATCCCC CTTTTCTTTC

    Gene models with high sequence identity

    1. AT5G66680.1 [+] show detail - dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
      E-value: 0; Score: 640.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit 3.5e-130
    HMMPanther Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit 1.8e-206

    See the detailed result >

    AT5G66680.1

    Model type
    Protein coding
    Short Description
    dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
    Curator Summary
    Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.
    Computational Description
    DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR