K37306

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37306

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37306

Determination of introduced cDNA(s)

  • J013002J06 - Rice Full-length cDNAs - Original: J013002J06

    full reading [+] show sequence

    Nucleotide sequence: J013002J06 - full reading 
    GTTTCCCTTC CCCCCACCCG ATTCGTCTCC CCCCTCCGGC GCCCCTCGAG 
    TTCTTGGATT CCCTCTTCTT TTTCTTCTTC TTCTTGCGTT GGTACAACAA 
    TCCGTCGAGA GCTCCGTGGC GTGGATTGGA TTAATTCTCT CTCGCCGAGG 
    AAGAAAGAAA AAAAAAAACG AGACGGAGGC ATCGAGGTGG CCGTCTCCCC 
    TCCGCCGCTA TAACAACAAG CCGCCGCCGC CGCCGCCGTT GTCGCCGCTT 
    TGCTCTCTCC GCTACTCCGG CGACCGGGGA GAGGGTAGTT GCATGATCGG 
    CAACATCAAT CTGAAGAATG GCTCTAAAAT CACCAGTGGA TTTTGCTGGC 
    TCAATCACTT CAGGCCAGAA GGACCCGTGT TGTTTTGGTG TGCCCGGCTG 
    CAATCCGCGA TGTGTTAGAT ACAATAAGAA ATCAAGAACA TGCCGATTGG 
    TTACTAGAGC CATATCCGTC GATCGCCCGC AGCTAGACTT CTCAGACTCA 
    GACTGGAAGA AGCAGTTCCA GGAGGATTTC GATAGGCGGT TCAGTTTGCC 
    TCACTTGAAA GATGTAATCG ACGTTGAACC GAGGCCAACA ACGTTTTCCC 
    TCAAGAGCAG GACCCCTCTG GAGAATGTTA ATGGTTCTAT GCAAGGATCA 
    TGGAATGGCT ATGTGAATGA CGATGACAGA GCACTTTTGA AGGTTATTAA 
    GTTTGCTTCA CCAACATCTG CTGGAGCTGA TTGCATTGAC CCTGATTGCA 
    GCTGGGTCGA ACAATGGGTG CACCGTGCTG GCCCACGTAA ACAAATATAT 
    TTTGAACCTC AGTATGTAAA GGCTGGAATT GTCACCTGTG GTGGACTTTG 
    CCCTGGTCTC AATGATGTCA TTCGGCAGAT TGTGCTTACA CTGGAAAAAT 
    ATGGAGTGAA AAACATTGCT GGAATACAGC ATGGTTTCCG TGGATTTTTT 
    GAGGATCATT TAGCAGAAGT GCCACTTAAT AGGCAAGTTG TCCAGAATAT 
    CAATCTTGCT GGTGGAAGTT TCTTAGGAGT TTCTCGTGGT GGAGCAAATA 
    TCTCAGACAT TGTCGACAGC ATACAGGCCC GGAGGCTTGA CATGCTCTTT 
    GTTCTAGGTG GAAATGGAAC TCATGCTGGA GCTAACCTTA TACATGAGGA 
    GTGCCGCAAG AGAAAACTGA AAGTATCAAT TGTGGGCGTT CCAAAAACCA 
    TTGATAATGA CATACTACTG ATGGACAAGA CATTTGGATT TGATACAGCA 
    GTTGAAGCAG CACAGAGAGC TATAAACTCT GCATATATTG AGGCACATTC 
    TGCATTTCAT GGCATTGGAT TGGTCAAGCT GATGGGAAGA AGCAGTGGCT 
    TTATCACAAT GCATGCTTCC CTGTCTAGTG GCCAAGTAGA TATCTGCCTG 
    ATACCTGAGG TACCGTTCAC TCTTGATGGG CCAAATGGAG TTCTTCAACA 
    CCTTGAGCAC TTGATAGAAA CCAAGGGATT TGCTCTGATT TGTGTAGCCG 
    AAGGAGCGGG ACAGGAACAT CTGCAACAGT CAAACGCAAC TGATGCATCA 
    GGGAACATGA TCCTTGGTGA TATCGGCGTG CACCTTCATC AGAAGATCAA 
    GGCCCATTTC AAGGAAATAG GAGTACATTC TGATGTGAAG TACATTGATC 
    CTACATACAT GGTCCGTGCT GTGCGTGCCA ATGCATCCGA TGCCATCCTA 
    TGCACTGTGC TTGGTCAGAA TGCTGTTCAT GGTGCATTTG CAGGGTTCAG 
    TGGCATCACA ACCGGCATAT GCAACACGCA CAACGTCTAC TTGCCAATCT 
    CAGAAGTCAT CAAGTCCACA AGGTTCGTCG ATCCAAACAG CAGGATGTGG 
    CACCGGTGTT TGACATCAAC AGGGCAACCA GACTTCCACT GATTCAGGTA 
    TTGACAGTGG AAGCTCATAG CAACTGAAGC TAAAAACTAT AGGCGGTTTT 
    GTGCTGTATA GTAAGAGTGG TGCTTGTGCC GCATCACTCG TTTGATGTTT 
    TTTCGTCTTT CATCAGAAAG AAACATCATC TTCCATTGAT CCTTGAGGTG 
    CAAGATGGAT ACAATAAGCA CCTCATTGAA AAGATAGCTT CTTTTTTATA 
    GATTAGCAGT ACATGGTTTA TTAGAGACCA CATAGAAGTA GAGAAGATTT 
    CTAACTGCAA GGGAGATGGT TAGCTCCCGT TACAACTGCA GAAACATATG 
    TACACATTAC ACATTCTTCA CAGCTGAAAT AATGGAGAGA ACATTGCCAC 
    C

    Gene models with high sequence identity

    1. AT2G22480.1 [+] show detail - phosphofructokinase 5
      E-value: 0; Score: 704.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPIR Pyrophosphate-dependent phosphofructokinase TP0108 5.9e-174
    HMMPanther PHOSPHOFRUCTOKINASE 9.9e-100
    Gene3D no description 9.6e-59
    HMMPfam Phosphofructokinase 2.8e-33
    superfamily Phosphofructokinase 6e-107
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24
    FPrintScan Phosphofructokinase 7.1e-24

    See the detailed result >

    AT2G22480.1

    Model type
    Protein coding
    Short Description
    phosphofructokinase 5
    Computational Description
    phosphofructokinase 5 (PFK5); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 4 (TAIR:AT5G61580.1); Has 7923 Blast hits to 7389 proteins in 2127 species: Archae - 28; Bacteria - 5127; Metazoa - 660; Fungi - 395; Plants - 392; Viruses - 2; Other Eukaryotes - 1319 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR