K37331

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37331

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37331

Determination of introduced cDNA(s)

  • J023147E24 - Rice Full-length cDNAs - Original: J023147E24

    full reading [+] show sequence

    Nucleotide sequence: J023147E24 - full reading 
    GGTACAATGA ACATGCCACC TTTAGCAGAA TGAAACAAGA CAGAAACGTT 
    ACAAGGAAAT GAGCATCGAT GGAGTCACAG GGGATTACCA AACCCAAATT 
    GACATCAATC TTCTCGCCGA CCAACTAGAG GCAAAACTAT GCGACGTTCC 
    TTTGGACGAC GGCGGCCGGC GACACGGCTC GCCGGAGTGC CACATTTCCA 
    TCGTGAAGCC GCAAGTCCGC CTCGTCGACG TATCGCAGTA CGCTCCGCAG 
    GTGCTGCTCG TCGGCGCCTA CCACCACAGG TCGCTGGACC GGTGTGAGCT 
    GGACAAGCTG GCGGCGCTCC GGCGTGCCCT CCCCGACGGC GACGACGAGC 
    GGGCGTCCAC GCTGAGGCGC TACCTGGCGG CCATCGCCGG CCTCGAAAGC 
    GAGGCGCGGA GCTACTACCG CGATGACACG GATGACATGG GCGCGGAGGA 
    GTTTGCGTTG ATGCTGCTGC TCGACGGGTG GTACATACTC CACTACTTCG 
    GCGTCGGCGT CGGCGGCGGC GGGAGAGCGG TGGACATCTT CGCCGTGCGC 
    GACGTGTTCT ACCTGCTCGA GAACCAGATA CCCTTCTTCA TCCTCGAGAA 
    GGTCTACGAG CTGATCCACT CTCCCCCTCC TTCTCCGGGA GCTACAGCCA 
    TCGCCGGCGG CGGGTCGTCG TCTTCCTCCG TCGTGGTTGT CGATGGGTTC 
    GTGCGCCATC TCCGGTCACT CCTCCGAGAC CAGGGCTACT CGAATCTGGA 
    GGTGGACATC ACCAGCACAC GCCCCTGTCA CCTCGTCCAC TTACTCCACA 
    TGCACTTCAC ACCCATGGCG ATGGCGCCGG CCGCCGACGA CGCTGCCGCT 
    GTCCCCATCC CCACCAGGCG CGCGCGCGCC ACCGTGTACC GCTGGCGCGG 
    GGCGACGCAG TACCACGCCG CCGGCGTGAG GTTCAAGAGA CGGGCCCTCG 
    GCCTCGGCGA CGCACGGTGC GTCCTCGACG TGGAGCTCCG GCGGCTGACG 
    CTGCACGTCC CGACGCTGAC GGTGGACAAC AACACGTGGC GGGTCCTGCG 
    CAACCTGATG GCGCTGGAGC AGAACAACCC AAACCTGGGC AGCCACGTCA 
    CGGCCTACTG CCTCTTCATG TCGCATCTCG CCGGCACGGC GAACGACGTC 
    GCGCTCCTGG CGAGCAAAGG CGTCGTCGTG CACTTCATGG GGTGCGACGA 
    GGACGTCGCT AAGGGATTCG CCGGCCTGTG CAGGGGCGTG GCGCTCAGCG 
    TCGACGACGC GCGCCAGAAC TACCTGCAGC CGACGTGGGA GAAGATGGAG 
    CGGCGGTACA GCAGCCGGCC AGTCAACTGG ATGGCGCTGC TGCGGCGGCG 
    GCATTTGAGC AACCCGCTGG TGGCGACCGC GCTGCTCGCC GCCATTGTTG 
    GCCTAGTCTG TGAAGTTCTT CAGGCTGTGT ATGCCGTCAA GAGCTACAAG 
    ACTAGAAGCT AAGCCACTGA GACGTATGCC CCTGTATGCC TACCGATTTT 
    ACGTTCATTA TCGAAGTACC AATCATTCTC CGCTGCGTTG GATTCTACTC 
    CACTATGTAT AGATGGCCAA AATGAGTCGC CCGACACGGC CTGGCCGGGA 
    CACGACTAAG GCACGGTCCA AGATCAGTCG GACCGGCTCG GCCTGAGATT 
    AACCATGTCG CGCCGTGCCC ATCCACGGCG GGCGCCTACA CCTATATCCC 
    AGGCATGGCC CAATAAGACT CGGATCATGC CATGCTGGCT CGAAGGCACG 
    ACTAGCATAC CGTATTGATC CTTGGAATAA GTTTATTTTG CCTCCCTCAT 
    TTTTTTAAGG CCGTGCCTTA TATGGCTAGA ATAAGTATAT TTTACCCCCT 
    C

    Gene models with high sequence identity

    1. AT2G36430.1 [+] show detail - Plant protein of unknown function (DUF247)
      E-value: 6e-23; Score: 106.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36430.1

    Model type
    Protein coding
    Short Description
    Plant protein of unknown function (DUF247)
    Computational Description
    Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR