K37912

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37912

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37912

Determination of introduced cDNA(s)

  • J033031H19 - Rice Full-length cDNAs - Original: J033031H19

    full reading [+] show sequence

    Nucleotide sequence: J033031H19 - full reading
    GAGAGTGGCC GCTGCTGCGT TCAGACTGCT CCTTCCTCCT CCTCGCGAGC 
    GAGAAATTAT TAATAAACAA TCGAGCTGAG CTGAGGCGAG GCGGCGGCGG
    AGGAATCGAT CCCCGGCGAG CGAGCGCGCG CGAGCAGATC CGCCGGCGGC
    GTGGGGGAGG CGAGGGTGGA TGACGAACGG GGCGGGGGGA GGAGGAGGAG
    GAGGGGGATT GGGGGGCACG AGGGTGCCGA CGTGGAGGGA GCGGGAGAAC
    AACCGGCGGA GGGAGCGGCG GCGGCGGGCG ATCGCGGCCA AGATCTACGC
    CGGGCTGCGC GCCTACGGCA ACTACAACCT CCCCAAGCAC TGCGACAACA
    ACGAGGTGCT CAAGGCGCTC TGCAACGAGG CCGGCTGGAC CGTCGAGCCC
    GACGGCACCA CCTACCGCAA GGGATGTAAA CCTCCTCAAG CAGAGCGTCC
    TGATCCAATT GGAAGATCGG CTTCGCCAAG CCCTTGCTCT TCATATCAAC
    CAAGTCCGCG GGCTTCATAC AACCCAAGTC CTGCATCGTC CTCCTTTCCA
    AGCTCTGGAT CCTCCTCGCA TATCACTATT GGTGGAAACA GCTTGATTGG
    TGGTGTCGAG GGAAGCTCCC TCATTCCATG GCTGAAGACA CTTCCGTTGA
    GTTCATCATA TGCCTCCTCC TCCAAGTTCC CACAGCTTCA CCATTTATAT
    TTCAATGGAG GTTCCATTAG TGCACCAGTG ACTCCTCCAT CCAGCTCCCC
    TACTCGCACA CCTCGCTTAA GGACTGATTG GGAGAACGCA AGTGTTCAGC
    CACCATGGGC TAGTGCAAAT TATACATCTC TTCCCAACTC TACACCACCG
    AGCCCAGGCC ACAAGATTGC ACCAGACCCA GCATGGCTCT CAGGATTTCA
    AATATCATCT GCTGGTCCCT CATCGCCAAC ATACAATCTT GTTTCGCCGA
    ATCCATTTGG GATTTTCAAA GAAGCTATTG CCAGCACTTC CAGGGTGTGC
    ACCCCTGGTC AGAGCGGAAC ATGTTCCCCG GTAATGGGTG GCATGCCGGC
    TCATCATGAT GTTCAGATGG TTGATGGTGC GCCGGATGAT TTTGCCTTTG
    GGAGCAGCAG CAATGGCAAC AATGAATCAC CTGGACTGGT GAAGGCATGG
    GAGGGGGAGC GGATACATGA AGAATGCGCC TCCGATGAGC TGGAGCTCAC
    TCTTGGGAGC TCAAAGACTC GTGCGGATCC CTCCTGATCG TGCTACTAGA
    GCGTCACTTC TTCGGTTGGG TTTATTTCAT ATTTATTTGT ATGCTACTCA
    TCTGTTTTTT AAGTTCAGTG TTTGTAGAAA GAGAGAAGGG AATTCAGAGA
    TCCTACCATG GTCCTCTGTA GATGATATAT CCATCCTCTT TCAGGGATCT
    GAACTTGTGT TAGCTTATGC AACTTATTAA CTTTTTTCTT TTATTTACTT
    TGGTTTTATT CTTTCTTTTT ATATTTTTTC TTTAGAATTG ATAAGAAAAT
    ATGGGAAGGG AAAGGAGTGC TTGC

    Gene models with high sequence identity

    1. AT1G78700.1 [+] show detail - BES1/BZR1 homolog 4
      E-value: 9e-62; Score: 234.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G78700.1

    Model type
    Protein coding
    Short Description
    BES1/BZR1 homolog 4
    Computational Description
    BES1/BZR1 homolog 4 (BEH4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 3 (TAIR:AT4G18890.1); Has 3228 Blast hits to 573 proteins in 95 species: Archae - 0; Bacteria - 18; Metazoa - 254; Fungi - 109; Plants - 296; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR