K38210

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38210

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38210

Determination of introduced cDNA(s)

  • J033125F08 - Rice Full-length cDNAs - Original: J033125F08

    full reading [+] show sequence

    Nucleotide sequence: J033125F08 - full reading 
    GTCTCCTCTT CCTCTGCCTG CCGCCCCCAA TCGCCGGCGA TGCCGCGCCC 
    CGCCGCCTCC TCCTCCAGCC GCCCTCCGCC GGAAGGCGAG CCGGCCTCGA 
    GCCGCGCGAC CTCCTCTGCG GAGTCCTCCA TCGCGTCCCT CATCGACCGC 
    GCCACCTCCA CCACCTCCCC CTCCGTCGAC CCGGCCCTCC TCCGCGCCAT 
    CAAGTCCGCC GCCCGCGCCT CCGACGGCGC CATCCGCGAC GCCTTCCGGA 
    TCCTCCTCTC CCTCATGTCC AAGCCCCACG CCCACGTGAG TAAGCTCCTC 
    CCTGCTGGTT TGATTCCCTT GACGAATTCG CCCAAACCCT AACTCGCCCA 
    ATCTTCAGGT GCGGCTGCTC GCGTTCATCA TCGCCGACGA GCTCTTCATG 
    CGCTCGAAGC TCTTCCGCTC CCTGCTGACC GACGTGCTGG ACGGCTTCCT 
    CCCGCTCGCC GTCGGCTTCC GCCGCGCCCA CCCGCTCCCG CCGCCCGCTG 
    CCTCCGCGAC CCTGCTCCGC AAGGCCGCCG TCCAGGCGCT CGAGCGCTGG 
    CACCACCTGT TCGGCGCGCA CTACCGCCAG CTCCGCCTCG CCGTCGAGTA 
    CCTCAAGGAG TCCGCCCGGG TCCAGTTCCC CGGCCTCCGT GCCGCCGTCG 
    AGGCTCGTGC CGCGCGGGAG GCTCGCACGC AGGAGATCTT AACTGCAAAG 
    GTCGAGCAGT TGCGCCGAAA CCTGGCAGCG ATTAAGGCTG AAATCCGCTC 
    CGCGATTGAT GAGATCCGCA ATGGGTTGGA TATCATTCGC ATCGAGAGTG 
    AAAAATTTAA CAATTATGCA AATGATGAGG ATGAGGAGCA GGAGATTGCC 
    TCTTTGGCGA TGCGGAGTAT TAGGATGGCT TCTTTGATGG CTGGGGAGTG 
    GGTTCCTGAG ACTCAGGAGA ATGAAGCAGT TTTCGACGCG TTGAGGGAGT 
    CATATCGGCT CCTTGTGTCA AAGCATTTGG TCACAGTTCA GGAATGGATA 
    TCTGTGCTGG TTAGGGTCAA TCTCGCAGAT AATCGTTTCA GAGATTCTGC 
    TTTGAAGGAA TTCATTGATG TTAAGAATGA AATACGAGCG GTGAGAAATC 
    GGTGTAGTGA GCTTGGTCTT AATCTTGACA ATGTCCATAG GCGGAAGGGT 
    GTTCAGGAGG AAGAGGATGA TGACTTTTGG GTTGAGGGGA ATATTGAGGT 
    TCCTAGCCCT GGTAGAGTAG GTACCAGTGC AGATGTTGCA AGTAGCAGCA 
    AGGACACTAG AAAGGGAAAG AAGCCAGTAG GTGGCACGGA TACTGATGAT 
    GGCAAGGCAC CTAATGCTGG CAATAGTCCT CAAGAGCTGG ATCCAGAGAG 
    GGCAAAGCTG CATGCAGAAG CCCCTGTGCT GCCATGGAGC TCTGTTTTGG 
    ATCGTTGGGG TTCTAACAGG GATGCACTTG TAAACCAAAG GGGACTTGAG 
    CTCGAGAGCC ATTGGGGAAG GGTGGATAAT GATGCTGTTA TACCTGCTGC 
    AAAGATTGCA GAATTAAATG TTCATAGTTC AATATATAGA GAAGATCCAG 
    TTGAGATTCT ACCATGCCTT GCACCTCTGA AGAAAGGAGG CCTTTGCCAG 
    AGAAGAGATC TCAAGATATG CCCGTTTCAT GGGCCTATTG TTCCACGAGA 
    TGCCGAAGGA AATCCAATTC ATCAGAGTGA TGGCCATTGT GATGCAGAAG 
    GAAATCCAGT TGGGCAGACT GATGGCCATT ATGATGCAGC AGTAAGTCCT 
    ATTGATCCGA ATGAAGACAG TTCTGATGTA AGAGAAAATA TGATTATGCC 
    AGATGGAAGC AGTGATGGTG AATGTATTTA TGAGTCCTCT CCTTCAAGAA 
    CGGCAAACAT AAATAATGAC ATTAGCGACA GCGATGTAGG TCATGACCTC 
    GGTAAAATTA CAGTGGAGCA GTTGGCGAGA CAGGCAGTGC AGAATGTCCG 
    GAAAAGAGAC AGGGATGACA AAAAAGCTCT GGAAAAAGCC CAACGAGCGA 
    GAATTCGTCA GCATAATCAA GATGTTTTGC GGGAAGCGGC TCTTGCTTCA 
    ACCTCGCGCT CAGCGGCAGA CTATGACCTC CCTTCGCCAG CAGTGTCTCG 
    ACGGGGACGC CGAGGTAAGA CAAAGGGACC AACACTGGCA TCGATGCTGA 
    AGAAGAAAGT TACTTCCAAA GATAGAATTG CAGAGAGGCT TCTGAATGCT 
    CGAGCTAGGG ATGCGACAAT AAGAGAAGTT TCACATACTG AAGATATGAG 
    CTACAGAGAA GCATTCCCAA ATCAATGGTA GTATAAGAAG CCTAATTTTT 
    GCTGAATAGG TTGGTGAATC GTCATGATAA GAGTGAATCA ATAATTCTTT 
    CTGTGCGCAG TTTTCAGTTA ACCACATGTC TTCTTGAGTT GCCCAGATAC 
    AAGTAAAATT GTAGGTTTTC ATTGTGAAGT TTAGTTTTTG TACAGTACAG 
    TAGATTGAAT AAGTTTCTTT TATTTCTTTT GCATGTTCAT TTTCCCTTTG 
    TAAACATGTA TATGTACCAC TCCATACTTG CTGGATTAAT AACTATATAC 
    GCTGAGGCTG CAGTTCG

    Gene models with high sequence identity

    1. AT3G61800.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (I...
      E-value: 3e-115; Score: 46.60

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPfam Protein of unknown function DUF2043 9.8e-38

    See the detailed result >

    AT3G61800.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR