K38546

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38546

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38546

Determination of introduced cDNA(s)

  • J013095N12 - Rice Full-length cDNAs - Original: J013095N12

    full reading [+] show sequence

    Nucleotide sequence: J013095N12 - full reading 
    GCTCCCCCAA AAAATTATCA TCCCGCCGCG ACGCCATGGC CGCTACCGTC 
    CTCCTCCTCT CGCCGCGCCT CGCCGTCGCG CCTCTACGGC CGCACCCCAG 
    GCTGGGGCTG ACCCCCACCG CAGTCGGACG GCCTCTTCCC CTCGCCTACC 
    TCGGCCGCCG CGCCGCCGCC GCGAGGCAGC TCGCCGCCGT CGCCGACCGG 
    AACGTCTACA ACGGCGTCTA CGGCCCATGG ACCGTCGAGG ACTCCGACGT 
    GCGCGAGGTC TTGCTGTATC GGTCCGGGCT GGTCACCGCC GCCGCGTCCT 
    TCGTGGCCGC CGCCTCGGCC GCGTTCCTCC CCGAGGGGAA CGCCGCCGGC 
    GACGCCATCA GGCAAGGCGC CGACCTCCTC TACGCCACCG GAGCGGCGGG 
    GCTGGGGCTT TCGCTCGTGC TGATTCACAT CTACGTCACT CCGATCAAGC 
    GGTTCCTCCA GGCGCTGTGG GTGGTCGGAG TCGTCGGGTC CATCGGGACG 
    TACGTCGCCG GCGCGCAGCC GCTCGACGAG AGCCTCGTCG GCTACGTTCT 
    CGACCACCCG GCTGCGCTGT GGTTCGTCGG CCCTACGTTT GCGGCGCTCA 
    CAGGCCTCGT CTTCAAGGAA GGTCTCTGCT ATGGAAAACT GGAAGCTGGT 
    ATTTTAACTT TTGTTATCCC TGGCCTTCTT CTTGGACACC TGTCTGGTCT 
    AATGGACAAC GGAACAAAAG CCGGCCTTTT AGGAGTTTGG ATGGTTCTCT 
    TCACTGTATT CGCAGCAAGA AAATTCCAGC AGCCCATCAA GGATGACATT 
    GGTGACAAAT CAGTTTTTAT GTTCAACGCC CTCCCTGAAG AAGAAAAGAA 
    GGCCTTGATA CAGAAGCTCG AGATGCAAAC TGAGACCGAT GGCTGAAACC 
    AGCACAGCAG CTTTAGTACG TGTACGTCCA AGGAAGTATA TGCAATTGAT 
    GTACATGTAT GGTAGTTTCA CAGATACCGG CACATGTCAG TAAGAGTAGT 
    AACTCAGTTT ATACATAGGA ATGAGAATGT ACTAGCTAGA GTAATTGCGA 
    TGTGTAGTTG CAAATCAGAT ATAAATATAT ATACATGTTG ATGGATCTCC 
    TCTGGGTATC TGATCAGAGA GGGGTCTTAC CCTGTACAAC TGTCTGTTCT 
    CATGTGATTA TCTTCTCTGT GCCTTACGGT GTATATACGT GAATTTGGCT

    Gene models with high sequence identity

    1. AT1G28140.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-71; Score: 265.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G28140.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR