K38604

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38604

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38604

Determination of introduced cDNA(s)

  • J013153L21 - Rice Full-length cDNAs - Original: J013153L21

    full reading [+] show sequence

    Nucleotide sequence: J013153L21 - full reading
    GTCTTCTTCC TCTCGCCGCC GCAGCGCGCG GCCGCCACTC CATCCACCAC 
    AATGGCGAAC CCCACGTCCC ACCGCCTCCT CCTCGCCGCG TAGCCCTATC
    GGCGAGCCGC TGCCGGTGGC TTCTCGGCAT CCCCGCGCCG TAGAGTCTCC
    GCCGCCGCCG TGTGCTCCGC AACATTGGGG TCGAGGGTTT TCGATTCGGC
    GAAGGGGGGG GGGGGGGGGG AAAGCTCGTC CCGTGGGAGG CGCCATGGGG
    AGCGAGGCGA AGGAGATGAA GTACAGGAGA AGGGCTAGGG TTCCAGAGCC
    CTTCGATTAC GGGCAATGCG GCGGCGACCG GAGTGGCGTG CTGGATTGGG
    GCGCGCTCAA GGAGAACCCC GTGGAGCTGC TCCGGAAGCT CGACGAGCTG
    CGGGACCACA TCACCAGGTC CTGCGAGATC ACCGACCAGC CGCGGGAGCG
    CCACCGCATG AGCCGCCGCA CGGCCTCGCT GCGCCCCTCG CACGCCGAGC
    CGCCGCCGCT AGGCCGTGGG CCGGAGCACT ACCGCTCACG CTACACGGGA
    AGGTACGGGT CTGGCTTTCC GCACAGTCCG AATGACCAGC TGCATCGGTC
    TATGCATAGA GATAGGTATG AGAGGCAGCC GAGTGGGCGG TTCCGGCAAT
    GGCCGGAGAG GCAGTGGGAG AATTCTGGGT ATCTTGGGGG GAATCACCAT
    CAGAGCACCT GCCAGTGTGC ACAGTGCCTT CATGGCCAGA GAGCTGTGAT
    GCAGGAGGAG CACATTCCCA TGACGAGGTA CTTTGCAGGC CAGCAGGGGT
    CTCACCTGTT CGATAGGTCC CCATCAGTCT CATCGGAGCT TGACCGGAGG
    TCTGTCGCTT CGTCATTGTA CTCTCATTTC TCGGTGTCGA AGAGGAGGAC
    AGAGTTTTTC AGGAAGAAGG CAGAGAGTTT CTGTCGTCCT GTGAGAGGCG
    CCGCTCCTTT CGTTGTATGC AGTTCTTGTA ACCAGCTGCT GCAGCTGCCT
    CCTGGGAAAT GCACAGCTCG GAAGCAGATT CAAGTTCGGT GTGGTTCGTG
    CTCGGAGATC GTTAGTTTCA AGCTTAAGGA AGTGAAAATT CATCCTTTGG
    TTGCGCCGAC ATCTTTCCCT GCATCAAAAA CAGTGGGGAG TTCCAGTCGT
    CAGGTTAACA AAAGTTTTGG GTGGTACCAA CATCAGGATG AAGGAAATTC
    TAGTTTCCAT AAGCTGCAAG CACAAGAGAG ATGGCAGCAG AACAAGGATC
    TTGCAGACAA TATTTCTGTG TCTTCTACTT CTAGTTATGA CAGAATAGAC
    AAAGAGTGTG GATCAAACAG GAGCAGTCAG TTACTATCAG TATCTGTTAG
    AAGGTCCAGA CTTGCAAATA TCCCAAAGGA TATACTATGT CAAGGAGATG
    CATACAGTCA AGTAGAAACT TCAGCATTTA ATACAGGCAA TCTACAGGCC
    CCAGTTATAG AGGACAAATG TGTCGATCCA TTTTCCAGTC GTCTAAAGGA
    TTGTAGTGGT GGAGATCGCA CAAGCAAGGA ATGTAGCCTA AATATCATGG
    CAGATTCTGT TGATGCTAAT GTTAGGGATG AAAGATCGGA CGTGACATAT
    GAGCAGAACA GCAAAGATCA TAAAGAAGGA TTTGGAGAAG AAACTGTCAG
    CAGTAGACAT GAGCAAAAGC TCAAAGAAAG TACAAGTGGC TTTTGTGATG
    ATGGAAGCAT GGGTAACATA GACAAGCTGA CGGCTGATAA TGATGATACC
    AGCAGCCTTG AAGATGGAGA CGTGAGCAAA AAGTATGAAG AAAAAATCAA
    ACAAGATGAC AACAACTTTC AATCAGAATT CATTACTGAG CGATATAGCA
    AATGCAGCAA AGAAGATAAT AACAGTGTCA TTCAAGTTGA AACTATAGCT
    ACGATATGCA AACAAGATGA CTTAGATGAT TGTTATAGTG AATTGCTCTC
    CCCAAATTCT GAACATGCCA TAATGCCATC GAAGCTTGAG TCATCAGTTA
    ATGAGCGCAC AAATTCTAGT TCTCGTGTTT CTTCTGAGGC TGAACTAGAC
    GAAGTTCAGT CTGCAGCTAC TAAGAACGGG GATTCAAAGT TTTTTGCTGG
    TTTTTTGAAG AAAGGTTTGA AGGACATTTC TTTGTTCAAT CAATCAGTGG
    ACAGTGCTAA GGTTTCAATC AATGGCCATT CAATCTCCGA ACGTGTCCTA
    CGGAAGGCCG AGAAGAAGTC TGGTCCAGTT GGCCCTGGTT CATATTGGTA
    TGACTACCGC GCTGGATTTT GGGGTGTCAT GGGACATGAG TGTAGTGGCA
    TCATCCCTCC ATTTATAAAG GAATTTAATT ATCCAATGCC GAAAAATTGT
    GCCGGTGGGA ACACAGGAGT TATTGTCAAT GGTAGAGAAC TTCATCAGAA
    AGACTTTGAA TTGCTTGCAG GAAGAGGTCT CCCACGGATA TCTGGAAAAT
    CATATTCTGT TGAGATCAAT GGAAATGTGA TTGATGAAAC AACTGGCAAA
    AAATTACGAA AGCTTGGAAA GCTTGCTCCT ACAGTTGAGA AGTTAAAACG
    TGGATTTGGC ATGCACGTCC CTGAAGAGAA AAGTTAGCTC TCTGGCTCTG
    ATGATGTTCC CTTGCTTTGC AAAAACTCAT TTCCACGTAA AAGCTGTCAA
    GGGAGTTAAA TTGGATTGTG GCATGGAAGA AGCCTTTAGA TTGTACTTCT
    TGAAGCTTGA GTGTGCAGCA ACAGTAATAC ACGAGTACCT AAGACGACCT
    GTTTTTTATA TATATTTACC ACTTACTCAT TCAAAGTTGA CAAATTGTCG
    TACAAATTCC ATTACTTCAT TTGAAGCATT CTTTAGGTAT ATATGACCTA
    AGCATGCGAA CAGCTCTAAG TTCCTCATGT GTCTGGGTAT GTTGTTTCCT
    GTCCCCTGCA TATGTTGTTG ATACAGAGCA ATAGAGTATA GACAATATTC
    TGGGTGTGTA TCGTTGTGGG CTTGTAATAT GTCTGCTATA CCAGTGCCTT
    TTTACATTAT ATTACACATG TATGTAAAGT TGTAAATATT TAATCTTAAC
    CACCTTTTGC TAGGTGGCAG ATGTGAATGT TTGATGATTT GGGCTTGAGG
    TTTCATTC

    Gene models with high sequence identity

    1. AT3G61670.1 [+] show detail - Protein of unknown function (DUF3133)
      E-value: 3e-51; Score: 201.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G61670.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3133)
    Computational Description
    Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR