K38945

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38945

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38945

Determination of introduced cDNA(s)

  • J013051B07 - Rice Full-length cDNAs - Original: J013051B07

    full reading [+] show sequence

    Nucleotide sequence: J013051B07 - full reading 
    GTTAATTTTG ATTGATTTTA TGACTTTTTT GTTGCCATGC ACTAATTTCG 
    TTTTGTAATT CATGAATGAA CTTAGGGAGA GAATAAAGGT TTTCTTGTTT 
    GCAAGAAAAA GATGGCAACC TCTCCAGAAT CTTTATGTGG CATTGGTCCA 
    CCACCATTTC GTCAATTTGT TGAGTATGTT GTGAACTTGA AGTTCGACGA 
    AGAGCCAAAC TATGCAAAGT GCATTGCTCT TTTTGATGGC ATTGTTGGTC 
    CAAATCCAGA TGGAAGACCA TTAAACACCG ATGGTGCCCA GAAGCTTGTA 
    TATCAGGTTG GTCAGAAGAG AGGCCGCCTC ACAGCGGCTG AAGATGAGGA 
    GCAACCTAAG AAAAAGATTA GAATGGGAAT GCCAGCGACC CAGTGGATTA 
    GTGTGTACAA TGCCCGTCGG CCAATGAAAC AGAGATACCA CTACAATGTA 
    GCAGATGATA GATTAGCACC ACATATTCAA AAAGGAAATG AAGATGGTTT 
    GTTTATAAGT TCAGTTTCAT CCTGTTCAGA TCTGTGGGCT TTAATTATGG 
    ATGCTGGCAC TGGTTTTACC GCCCAAGTAC ATGAACTCTC CCATTACTTT 
    CTTCACAAGG AATGGATAAT GGAGCAGTGG GAGAGAAATT ACTATATTAC 
    TTCTTTGGCT GGTTCAAATA ATGGAAGCTC GGTGGTGATC ATGTCAACAG 
    GAACGCCATA TGCACAGCAA TCCTACAAAG TAAGTGATTC ATTTCCCTTC 
    AAATGGATAA ACAAAAAGTG GAAGGAGGGG TTCTATGTCA CTGCCTTGGC 
    CACAGCAGGA AGCCGATGGG CTGTGGTTAT GTCCCGGAAC GCTGGTTTCA 
    CACATCAGGT AGTAGAACTT GATTTCTTAT ATCCGAGTGA AGGAATCCAT 
    CAACGCTGGG ATAGTGGTTA TCGCATAACT GCAACAGCAG CCACATGTGA 
    CCAGGTGGCT TTGATCTTGA GCATACCTAG AAGAAAGCCT AACGATGAAA 
    CACAGGAGAC ACTGAGAACA TCTGCTTTTC CTGGCCAGCA TGTAAAGGAA 
    AAATGGGCAA AAAATCTTTA TTTAGGCTCC ATATGCTATG GAAGATCAGT 
    GTCGTGAAGT GCATTTTCCC GAGCTGGTCC TTTGTAAGAT TAAGATCTAA 
    TAATATGAAC AACCGGTTTT GTGACAAGAT AATGGGGGGA TTTTGAAGTG 
    CAAACTTTAA CTT

    Gene models with high sequence identity

    1. AT2G25760.1 [+] show detail - Protein kinase family protein
      E-value: 9e-166; Score: 580.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther gb def: Hypothetical protein At2g25750 3.5e-86
    HMMPanther CASEIN KINASE-RELATED 3.5e-86

    See the detailed result >

    AT2G25760.1

    Model type
    Protein coding
    Short Description
    Protein kinase family protein
    Computational Description
    Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 17667 Blast hits to 17599 proteins in 1508 species: Archae - 20; Bacteria - 6581; Metazoa - 4779; Fungi - 1455; Plants - 2098; Viruses - 217; Other Eukaryotes - 2517 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR